Search Results - "Baerenfaller, Katja"

Arabidopsis Proteomics: A Simple and Standardizable Workflow for Quantitative Proteome Characterization

Rödiger, Anja^Aff6, Agne, Birgit^Aff7, Baerenfaller, Katja^Aff8, Baginsky, Sacha^Aff6

Jorrin-Novo, Jesus V.^Aff2, Komatsu, Setsuko^Aff3, Weckwerth, Wolfram^Aff4, Wienkoop, Stefanie^Aff5, Walker, John M.^Aff1

Global COVID-19 lockdown highlights humans as both threats and custodians of the environment

Bates, Amanda E, Primack, Richard B, Biggar, Brandy S, Bird, Tomas J, Clinton, Mary E, Command, Rylan J, Richards, Cerren, Shellard, Marc, Geraldi, Nathan R, Vergara, Valeria, Acevedo-Charry, Orlando, Colón-Piñeiro, Zuania, Ocampo, David, Ocampo-Peñuela, Natalia, Sánchez-Clavijo, Lina M, Adamescu, Cristian M, Cheval, Sorin, Racoviceanu, Tudor, Adams, Matthew D, Kalisa, Egide, Kuuire, Vincent Z, Aditya, Vikram, Anderwald, Pia, Wiesmann, Samuel, Wipf, Sonja, Badihi, Gal, Henderson, Matthew G, Loetscher, Hanspeter, Baerenfaller, Katja, Benedetti-Cecchi, Lisandro, Bulleri, Fabio, Bertocci, Iacopo, Maggi, Elena, Rindi, Luca, Ravaglioli, Chiara, Boerder, Kristina, Bonnel, Julien, Mathias, Delphine, Archambault, Philippe, Chauvaud, Laurent, Braun, Camrin D, Thorrold, Simon R, Brownscombe, Jacob W, Midwood, Jonathan D, Boston, Christine M, Brooks, Jill L, Cooke, Steven J, China, Victor, Roll, Uri, Belmaker, Jonathan, Zvuloni, Assaf, Coll, Marta, Ortega, Miquel, Connors, Brendan, Lacko, Lisa, Jayathilake, Dinusha RM, Costello, Mark J, Crimmins, Theresa M, Barnett, LoriAnne, Denny, Ellen G, Gerst, Katharine L, Marsh, RL, Posthumus, Erin E, Rodriguez, Reilly, Rosemartin, Alyssa, Schaffer, Sara N, Switzer, Jeff R, Wong, Kevin, Cunningham, Susan J, Sumasgutner, Petra, Amar, Arjun, Thomson, Robert L, Stofberg, Miqkayla, Hofmeyr, Sally, Suri, Jessleena, Stuart-Smith, Rick D, Day, Paul B, Edgar, Graham J, Cooper, Antonia T, De Leo, Fabio Cabrera, Garner, Grant, Brisay, Paulson G Des, Schrimpf, Michael B, Koper, Nicola, Diamond, Michael S, Dwyer, Ross G, Baker, Cameron J, Franklin, Craig E, Efrat, Ron, Berger-Tal, Oded, Hatzofe, Ohad, Eguíluz, Víctor M, Rodríguez, Jorge P, Fernández-Gracia, Juan, Elustondo, David, Calatayud, Vicent, English, Philina A, Archer, Stephanie K, Dudas, Sarah E, Haggarty, Dana R

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Assessing Different Feature Selection Methods Applied to a Bulk RNA Sequencing Dataset with Regard to Biomedical Relevance

Zhakparov, Damir^{Aff46, Aff47}, Moriarty, Kathleen^Aff46, Lunjani, Nonhlanhla^{Aff46, Aff48}, Schmid, Marco^Aff49, Hlela, Carol^Aff50, Levin, Michael^Aff51, Mankahla, Avumile^Aff52, Consortium, SOS-ALL, Akdis, Cezmi^Aff46, O’Mahony, Liam^{Aff46, Aff48}, Baerenfaller, Katja^{Aff46, Aff47}, Roqueiro, Damian^{Aff47, Aff53}

Filipe, Joaquim, Editorial Board Member^Aff1, Ghosh, Ashish, Editorial Board Member^Aff2, Prates, Raquel Oliveira, Editorial Board Member^Aff3, Zhou, Lizhu, Editorial Board Member^Aff4, Koprinska, Irena, editor^Aff5, Mignone, Paolo, editor^Aff6, Guidotti, Riccardo, editor^Aff7, Jaroszewicz, Szymon, editor^Aff8, Fröning, Holger, editor^Aff9, Gullo, Francesco, editor^Aff10, Ferreira, Pedro M., editor^Aff11, Roqueiro, Damian, editor^Aff12, Ceddia, Gaia, editor^Aff13, Nowaczyk, Slawomir, editor^Aff14, Gama, João, editor^Aff15, Ribeiro, Rita, editor^Aff16, Gavaldà, Ricard, editor^Aff17, Masciari, Elio, editor^Aff18, Ras, Zbigniew, editor^Aff19, Ritacco, Ettore, editor^Aff20, Naretto, Francesca, editor^Aff21, Theissler, Andreas, editor^Aff22, Biecek, Przemyslaw, editor^Aff23, Verbeke, Wouter, editor^Aff24, Schiele, Gregor, editor^Aff25, Pernkopf, Franz, editor^Aff26, Blott, Michaela, editor^Aff27, Bordino, Ilaria, editor^Aff28, Danesi, Ivan Luciano, editor^Aff29, Ponti, Giovanni, editor^Aff30, Severini, Lorenzo, editor^Aff31, Appice, Annalisa, editor^Aff32, Andresini, Giuseppina, editor^Aff33, Medeiros, Ibéria, editor^Aff34, Graça, Guilherme, editor^Aff35, Cooper, Lee, editor^Aff36, Ghazaleh, Naghmeh, editor^Aff37, Richiardi, Jonas, editor^Aff38, Saldana, Diego, editor^Aff39, Sechidis, Konstantinos, editor^Aff40, Canakoglu, Arif, editor^Aff41, Pido, Sara, editor^Aff42, Pinoli, Pietro, editor^Aff43, Bifet, Albert, editor^Aff44, Pashami, Sepideh, editor^Aff45

The epithelial barrier: The gateway to allergic, autoimmune, and metabolic diseases and chronic neuropsychiatric conditions

Yazici, Duygu, Ogulur, Ismail, Pat, Yagiz, Babayev, Huseyn, Barletta, Elena, Ardicli, Sena, Bel imam, Manal, Huang, Mengting, Koch, Jana, Li, Manru, Maurer, Debbie, Radzikowska, Urszula, Satitsuksanoa, Pattraporn, Schneider, Stephan R., Sun, Na, Traidl, Stephan, Wallimann, Alexandra, Wawrocki, Sebastian, Zhakparov, Damir, Fehr, Danielle, Ziadlou, Reihane, Mitamura, Yasutaka, Brüggen, Marie-Charlotte, van de Veen, Willem, Sokolowska, Milena, Baerenfaller, Katja, Nadeau, Kari, Akdis, Mubeccel, Akdis, Cezmi A.

Machine Learning Successfully Detects Patients with COVID-19 Prior to PCR Results and Predicts Their Survival Based on Standard Laboratory Parameters in an Observational Study

Styrzynski, Filip, Zhakparov, Damir^{Aff2, Aff3}, Schmid, Marco, Roqueiro, Damian^{Aff3, Aff5}, Lukasik, Zuzanna^{Aff1, Aff2}, Solek, Julia^{Aff6, Aff7}, Nowicki, Jakub, Dobrogowski, Milosz, Makowska, Joanna^{Aff1, IDs40121022007078_cor9}, Sokolowska, Milena^{Aff2, Aff10, IDs40121022007078_cor10}, Baerenfaller, Katja^{Aff2, Aff3, IDs40121022007078_cor11}

Global COVID-19 lockdown highlights humans as both threats and custodians of the environment

Bates, Amanda E., Primack, Richard B., Biggar, Brandy S., Bird, Tomas J., Clinton, Mary E., Command, Rylan J., Richards, Cerren, Shellard, Marc, Geraldi, Nathan R., Vergara, Valeria, Acevedo-Charry, Orlando, Colón-Piñeiro, Zuania, Ocampo, David, Ocampo-Peñuela, Natalia, Sánchez-Clavijo, Lina M., Adamescu, Cristian M., Cheval, Sorin, Racoviceanu, Tudor, Adams, Matthew D., Kalisa, Egide, Kuuire, Vincent Z., Aditya, Vikram, Anderwald, Pia, Wiesmann, Samuel, Wipf, Sonja, Badihi, Gal, Henderson, Matthew G., Loetscher, Hanspeter, Baerenfaller, Katja, Benedetti-Cecchi, Lisandro, Bulleri, Fabio, Bertocci, Iacopo, Maggi, Elena, Rindi, Luca, Ravaglioli, Chiara, Boerder, Kristina, Bonnel, Julien, Mathias, Delphine, Archambault, Philippe, Chauvaud, Laurent, Braun, Camrin D., Thorrold, Simon R., Brownscombe, Jacob W., Midwood, Jonathan D., Boston, Christine M., Brooks, Jill L., Cooke, Steven J., China, Victor, Roll, Uri, Belmaker, Jonathan, Zvuloni, Assaf, Coll, Marta, Ortega, Miquel, Connors, Brendan, Lacko, Lisa, Jayathilake, Dinusha R.M., Costello, Mark J., Crimmins, Theresa M., Barnett, LoriAnne, Denny, Ellen G., Gerst, Katharine L., Marsh, R.L., Posthumus, Erin E., Rodriguez, Reilly, Rosemartin, Alyssa, Schaffer, Sara N., Switzer, Jeff R., Wong, Kevin, Cunningham, Susan J., Sumasgutner, Petra, Amar, Arjun, Thomson, Robert L., Stofberg, Miqkayla, Hofmeyr, Sally, Suri, Jessleena, Stuart-Smith, Rick D., Day, Paul B., Edgar, Graham J., Cooper, Antonia T., De Leo, Fabio Cabrera, Garner, Grant, Des Brisay, Paulson G., Schrimpf, Michael B., Koper, Nicola, Diamond, Michael S., Dwyer, Ross G., Baker, Cameron J., Franklin, Craig E., Efrat, Ron, Berger-Tal, Oded, Hatzofe, Ohad, Eguíluz, Víctor M., Rodríguez, Jorge P., Fernández-Gracia, Juan, Elustondo, David, Calatayud, Vicent, English, Philina A., Archer, Stephanie K., Dudas, Sarah E., Haggarty, Dana R., Gallagher, Austin J., Shea, Brendan D., Shipley, Oliver N., Gilby, Ben L., Ballantyne, Jasmine, Olds, Andrew D., Henderson, Christopher J., Schlacher, Thomas A., Halliday, William D., Brown, Nicholas A.W., Woods, Mackenzie B., Balshine, Sigal, Juanes, Francis, Rider, Mitchell J., Albano, Patricia S., Hammerschlag, Neil, Hays, Graeme C., Esteban, Nicole, Pan, Yuhang, He, Guojun, Tanaka, Takanao, Hensel, Marc J.S., Orth, Robert J., Patrick, Christopher J., Hentati-Sundberg, Jonas, Olsson, Olof, Hessing-Lewis, Margot L., Higgs, Nicholas D., Hindell, Mark A., McMahon, Clive R., Harcourt, Rob, Guinet, Christophe, Hirsch, Sarah E., Perrault, Justin R., Hoover, Shelby R., Reilly, Jennifer D., Hobaiter, Catherine, Gruber, Thibaud, Huveneers, Charlie, Udyawer, Vinay, Clarke, Thomas M., Kroesen, Laura P., Hik, David S., Cherry, Seth G., Del Bel Belluz, Justin A., Jackson, Jennifer M., Lai, Shengjie, Lamb, Clayton T., LeClair, Gregory D., Parmelee, Jeffrey R., Chatfield, Matthew W.H., Frederick, Cheryl A., Lee, Sangdon, Park, Hyomin, Choi, Jaein, LeTourneux, Frédéric, Grandmont, Thierry, de-Broin, Frédéric Dulude, Bêty, Joël, Gauthier, Gilles, Legagneux, Pierre, Lewis, Jesse S., Haight, Jeffrey, Liu, Zhu, Lyon, Jarod P., Hale, Robin, D'Silva, Dallas, MacGregor-Fors, Ian, Arbeláez-Cortés, Enrique, Estela, Felipe A., Sánchez-Sarria, Camilo E., García-Arroyo, Michelle, Aguirre-Samboní, Giann K., Franco Morales, Juan C., Malamud, Shahar, Gavriel, Tal, Buba, Yehezkel, Salingré, Shira, Lazarus, Mai, Yahel, Ruthy, Ari, Yigael Ben, Miller, Eyal, Sade, Rotem, Lavian, Guy, Birman, Ziv, Gury, Manor, Baz, Harel, Baskin, Ilia, Penn, Alon, Dolev, Amit, Licht, Ogen, Karkom, Tabi, Davidzon, Sharon, Berkovitch, Avi, Yaakov, Ofer, Manenti, Raoul, Mori, Emiliano, Ficetola, Gentile Francesco, Lunghi, Enrico, March, David, Godley, Brendan J., Martin, Cecilia, Mihaly, Steven F., Barclay, David R., Thomson, Dugald J.M., Dewey, Richard, Bedard, Jeannette, Miller, Aroha, Dearden, Amber, Chapman, Jennifer, Dares, Lauren, Borden, Laura, Gibbs, Donna, Schultz, Jessica, Sergeenko, Nikita, Francis, Fiona, Weltman, Amanda, Moity, Nicolas, Ramírez-González, Jorge, Mucientes, Gonzalo, Alonso-Fernández, Alexandre, Namir, Itai, Bar-Massada, Avi, Chen, Ron, Yedvab, Shmulik, Okey, Thomas A., Oppel, Steffen, Arkumarev, Volen, Bakari, Samuel, Dobrev, Vladimir, Saravia-Mullin, Victoria, Bounas, Anastasios, Dobrev, Dobromir, Kret, Elzbieta, Mengistu, Solomon, Pourchier, Cloé, Ruffo, Alazar, Tesfaye, Million, Wondafrash, Mengistu, Nikolov, Stoyan C., Palmer, Charles, Sileci, Lorenzo, Rex, Patrick T., Lowe, Christopher G., Peters, Francesc, Pine, Matthew K., Radford, Craig A., Wilson, Louise, McWhinnie, Lauren, Scuderi, Alessia, Jeffs, Andrew G., Prudic, Kathleen L., Larrivée, Maxim, McFarland, Kent P., Solis, Rodrigo, Hutchinson, Rebecca A., Queiroz, Nuno, Furtado, Miguel A., Sims, David W., Southall, Emily, Quesada-Rodriguez, Claudio A., Diaz-Orozco, Jessica P., Rodgers, Ku'ulei S., Severino, Sarah J.L., Graham, Andrew T., Stefanak, Matthew P., Madin, Elizabeth M.P., Ryan, Peter G., Maclean, Kyle, Weideman, Eleanor A., Şekercioğlu, Çağan H., Kittelberger, Kyle D., Kusak, Josip, Seminoff, Jeffrey A., Hanna, Megan E., Shimada, Takahiro, Meekan, Mark G., Smith, Martin K.S., Mokhatla, Mohlamatsane M., Soh, Malcolm C.K., Pang, Roanna Y.T., Ng, Breyl X.K., Lee, Benjamin P.Y.-H., Loo, Adrian H.B., Er, Kenneth B.H., Souza, Gabriel B.G., Stallings, Christopher D., Curtis, Joseph S., Faletti, Meaghan E., Peake, Jonathan A., Schram, Michael J., Wall, Kara R., Terry, Carina, Rothendler, Matt, Zipf, Lucy, Ulloa, Juan Sebastián, Hernández-Palma, Angélica, Gómez-Valencia, Bibiana, Cruz-Rodríguez, Cristian, Herrera-Varón, Yenifer, Roa, Margarita, Rodríguez-Buriticá, Susana, Ochoa-Quintero, Jose Manuel, Vardi, Reut, Vázquez, Víctor, Requena-Mesa, Christian, Warrington, Miyako H., Taylor, Michelle E., Woodall, Lucy C., Stefanoudis, Paris V., Zhang, Xiangliang, Yang, Qiang, Zukerman, Yuval, Sigal, Zehava, Ayali, Amir, Clua, Eric E.G., Carzon, Pamela, Seguine, Clementine, Corradini, Andrea, Pedrotti, Luca, Foley, Catherine M., Gagnon, Catherine Alexandra, Panipakoochoo, Elijah, Milanes, Celene B., Botero, Camilo M., Velázquez, Yunior R., Milchakova, Nataliya A., Morley, Simon A., Martin, Stephanie M., Nanni, Veronica, Otero, Tanya, Wakeling, Julia, Abarro, Sarah, Piou, Cyril, Sobral, Ana F.L., Soto, Eulogio H., Weigel, Emily G., Bernal-Ibáñez, Alejandro, Gestoso, Ignacio, Cacabelos, Eva, Cagnacci, Francesca, Devassy, Reny P., Loretto, Matthias-Claudio, Moraga, Paula, Rutz, Christian, Duarte, Carlos M.

Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation

Bazin, Jérémie, Baerenfaller, Katja, Gosai, Sager J., Gregory, Brian D., Crespi, Martin, Bailey-Serres, Julia

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A long photoperiod relaxes energy management in Arabidopsis leaf six

Baerenfaller, Katja, Massonnet, Catherine, Hennig, Lars, Russenberger, Doris, Sulpice, Ronan, Walsh, Sean, Stitt, Mark, Granier, Christine, Gruissem, Wilhelm

The KnownLeaf literature curation system captures knowledge about Arabidopsis leaf growth and development and facilitates integrated data mining

Szakonyi, Dóra, Van Landeghem, Sofie, Baerenfaller, Katja, Baeyens, Lieven, Blomme, Jonas, Casanova-Sáez, Rubén, De Bodt, Stefanie, Esteve-Bruna, David, Fiorani, Fabio, Gonzalez, Nathalie, Grønlund, Jesper, Immink, Richard G.H., Jover-Gil, Sara, Kuwabara, Asuka, Muñoz-Nortes, Tamara, van Dijk, Aalt D.J., Wilson-Sánchez, David, Buchanan-Wollaston, Vicky, Angenent, Gerco C., Van de Peer, Yves, Inzé, Dirk, Micol, José Luis, Gruissem, Wilhelm, Walsh, Sean, Hilson, Pierre

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Protein Abundance Changes and Ubiquitylation Targets Identified after Inhibition of the Proteasome with Syringolin A

Svozil, Julia ^‡, Hirsch-Hoffmann, Matthias ^‡, Dudler, Robert ^§, Gruissem, Wilhelm ^‡, Baerenfaller, Katja

Large-Scale Proteomics of the Cassava Storage Root and Identification of a Target Gene to Reduce Postharvest Deterioration

Vanderschuren, Hervé, Nyaboga, Evans, Poon, Jacquelyne S., Baerenfaller, Katja, Grossmann, Jonas, Hirsch-Hoffmann, Matthias, Kirchgessner, Norbert, Nanni, Paolo, Gruissem, Wilhelm

Common and Specific Protein Accumulation Patterns in Different Albino/Pale-Green Mutants Reveals Regulon Organization at the Proteome Level

Motohashi, Reiko, Rödiger, Anja, Agne, Birgit, Baerenfaller, Katja, Baginsky, Sacha

Plastid Proteome Assembly without Toc159: Photosynthetic Protein Import and Accumulation of N-Acetylated Plastid Precursor Proteins

Bischof, Sylvain, Baerenfaller, Katja, Wildhaber, Thomas, Troesch, Raphael, Vidi, Pierre-Alexandre, Roschitzki, Bernd, Hirsch-Hoffmann, Matthias, Hennig, Lars, Kessler, Felix, Gruissem, Wilhelm, Baginsky, Sacha

Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF)

Reiland, Sonja, Finazzi, Giovanni, Endler, Anne, Willig, Adrian, Baerenfaller, Katja, Grossmann, Jonas, Gerrits, Bertran, Rutishauser, Dorothea, Gruissem, Wilhelm, Rochaix, Jean-David, Baginsky, Sacha

Jasmonate Controls Polypeptide Patterning in Undamaged Tissue in Wounded Arabidopsis Leaves

Gfeller, Aurélie, Baerenfaller, Katja, Loscos, Jorge, Chételat, Aurore, Baginsky, Sacha, Farmer, Edward E.

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Joshi, Hiren J., Hirsch-Hoffmann, Matthias, Baerenfaller, Katja, Gruissem, Wilhelm, Baginsky, Sacha, Schmidt, Robert, Schulze, Waltraud X., Sun, Qi, van Wijk, Klaas J., Egelhofer, Volker, Wienkoop, Stefanie, Weckwerth, Wolfram, Bruley, Christophe, Rolland, Norbert, Toyoda, Tetsuro, Nakagami, Hirofumi, Jones, Alexandra M., Briggs, Steven P., Castleden, Ian, Tanz, Sandra K., Millar, A. Harvey, Heazlewood, Joshua L.

The Mass Distance Fingerprint: A statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry

Potthast, Frank, Gerrits, Bertran, Häkkinen, Jari, Rutishauser, Dorothea, Ahrens, Christian H., Roschitzki, Bernd, Baerenfaller, Katja, Munton, Richard P., Walther, Pascal, Gehrig, Peter, Seif, Philipp, Seebergerg, Peter H., Schlapbach, Ralph

Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism

Seaton, Daniel D^{Aff1, Aff4}, Graf, Alexander^{Aff2, Aff5}, Baerenfaller, Katja^{Aff2, Aff6}, Stitt, Mark, Millar, Andrew J^{Aff1, IDMSB177962_cor5}, Gruissem, Wilhelm^{Aff2, IDMSB177962_cor6}