Sökresultat - "Comparative genomics"

Taxonomic, genomic, and ecological insights into a novel Flavobacteriaceae strain from coastal tidal flats.

Wang, Haohao¹ (AUTHOR), Liu, Jiahui¹ (AUTHOR), Guo, Yifan¹ (AUTHOR), Chen, Yaqin¹ (AUTHOR), Zhang, Chi¹ (AUTHOR), He, Shan^2,3 (AUTHOR), Zhang, Weiyan² (AUTHOR) zhangweiyan13@126.com, Ding, Lijian² (AUTHOR) dinglijian@nbu.edu.cn

Chromosome Ordinal Number-Related Genomic Stability Revealed Among Oryza and Other Poaceae Plants.

Wang, Xiyin^1,2,3 (AUTHOR) wangxiyin@ncst.edu.cn, Liu, Quanlong^1,2 (AUTHOR), Song, Bowen^1,3 (AUTHOR), Wang, Jiangli^3,4 (AUTHOR), Wang, Wei^1,4 (AUTHOR), Qi, Huilong^1,2 (AUTHOR), Zhang, Huizhe^1,3 (AUTHOR), Jia, Yuelong^1,4 (AUTHOR), Li, Yingjie² (AUTHOR), Li, Zongjin² (AUTHOR), Tian, Miaoyu¹ (AUTHOR), Cao, Yixin¹ (AUTHOR), Jin, Yongchao² (AUTHOR)

Characterisation of the Gillenia S-locus provides insight into evolution of the nonself-recognition self-incompatibility system in apple.

Wang, Ruiling¹ (AUTHOR), Deng, Cecilia H.¹ (AUTHOR), Cornille, Amandine^2,3 (AUTHOR), Marande, William⁴ (AUTHOR), López-Girona, Elena⁵ (AUTHOR), Foster, Toshi⁶ (AUTHOR), Bowatte, Deepa⁵ (AUTHOR), Chen, Ting-Hsuan^1,7 (AUTHOR), Chagné, David⁵ (AUTHOR), Schaffer, Robert J.^6,8 (AUTHOR) robert.schaffer@plantandfood.co.nz, Ireland, Hilary S.¹ (AUTHOR) hilary.ireland@plantandfood.co.nz

Unbiased anchors for reliable genome-wide synteny detection.

Käther, Karl K.^1,2 (AUTHOR) karl@bioinf.uni-leipzig.de, Remmel, Andreas^2,3 (AUTHOR) andreas.remmel@cos.uni-heidelberg.de, Lemke, Steffen^2,3 (AUTHOR) steffen.lemke@uni-hohenheim.de, Stadler, Peter F.^1,2,4,5,6,7 (AUTHOR) studla@bioinf.uni-leipzig.de

Promoter Analysis and Dissection Using Reporter Genes, Comparative Genomics, and Gel Shift Assays in Phytophthora

Vo, Nguyen N. T.^Aff4, Judelson, Howard S.^Aff4

Gerth, Monica L.^Aff2, Bradshaw, Rosie E.^Aff3, Walker, John M.^Aff1

Structural and Functional Characterization of a Putative Type VI Secretion System Protein in Cronobacter sakazakii as a Potential Therapeutic Target: A Computational Study.

Akter, Nurun Nahar¹ (AUTHOR), Uddin, Md. Moin² (AUTHOR), Uddin, Nesar³ (AUTHOR), Asha, Israt Jahan¹ (AUTHOR), Uddin, Md Soyeb⁴ (AUTHOR), Hossain, Md. Arju⁵ (AUTHOR), Alam, Fahadul⁶ (AUTHOR), Shifat, Siratul Kubra⁷ (AUTHOR), Zihad, Md. Abu⁸ (AUTHOR), Rahman, Md Habibur^9,10 (AUTHOR) habib@iu.ac.bd

Phylogenetic analysis of Asiatic species in the tropical genus Beilschmiedia (Lauraceae).

Zhu, Wen¹ (AUTHOR), Ma, Jurong² (AUTHOR), Tan, Yunhong³ (AUTHOR) tyh@xtbg.org.cn, Song, Yu² (AUTHOR) songyu@gxnu.edu.cn, Xin, Peiyao¹ (AUTHOR) xpytgyx@163.com

Tracing the path from conservation to expansion evolutionary insights into NLR genes in oleaceae.

Parvez, Saba¹ (AUTHOR), Asif, Maryam¹ (AUTHOR), Ahmad, Alizay¹ (AUTHOR), Javaid, Iqra¹ (AUTHOR), Rasheed, Muhammad Zaman¹ (AUTHOR), Iftikhar, Romana¹ (AUTHOR), Aljarba, Nada H.² (AUTHOR), Zafar, Rabia¹ (AUTHOR), sarwar, Aqsa¹ (AUTHOR), Khan, Rao Sohail Ahmed¹ (AUTHOR), Serfraz, Saad¹ (AUTHOR) serfraz.saad@gmail.com

Discovery of Evolutionary Loss of the Ubiquitin-like Autophagy-Related ATG12 System in a Lineage of Apicomplexa.

Lin, Xiaoxia X.¹ (AUTHOR) lxx870611@yahoo.co.jp, Bai, Yun D.¹ (AUTHOR) baiyun426@yeah.net, Wang, Sichang T.¹ (AUTHOR) 23fm0104@student.gs.chiba-u.jp, Nozawa, Akira² (AUTHOR) nozawa.akira.my@ehime-u.ac.jp, Sawasaki, Tatsuya² (AUTHOR) sawasaki.tatsuya.mf@ehime-u.ac.jp, Masatani, Tatsunori^3,4,5 (AUTHOR) masatani.tatsunori.j9@f.gifu-u.ac.jp, Hikosaka, Kenji¹ (AUTHOR) hikosaka@chiba-u.jp, Asada, Masahito⁶ (AUTHOR) masada@obihiro.ac.jp, Sakamoto, Hirokazu¹ (AUTHOR) hzsakamoto@chiba-u.jp

Methods for Bioinformatic Prediction of Genuine sRNAs from Outer Membrane Vesicles

Ali, Ali^Aff4, Salem, Mohamed^Aff4

Jay, Steven^Aff2, Pirolli, Nicholas^Aff3, Walker, John M.^Aff1

Assessment of the whole genome sequencing of Lactiplantibacillus plantarum 13-3 for elucidation of novel bacteriocin producing gene cluster and confirmation of its potential probiotic functionality and safety applications.

Aziz, Tariq^1,2 (AUTHOR) iwockd@gmail.com, Naveed, Muhammad³ (AUTHOR), Shabbir, Muhammad Aqib^3,4 (AUTHOR), Khan, Ayaz Ali⁵ (AUTHOR), Sarwar, Abid¹ (AUTHOR), Haq, Taqweem Ul⁵ (AUTHOR), Zhennai, Yang¹ (AUTHOR) yangzhennai@163.com, Alharbi, Metab⁶ (AUTHOR), Alasmari, Abdullah F.⁶ (AUTHOR), Albekairi, Thamer H.⁶ (AUTHOR)

Chromosome level assemblies of Nakaseomyces (Candida) bracarensis uncover two distinct clades and define its adhesin repertoire.

Marcet-Houben, Marina^1,2,3 (AUTHOR), Księżopolska, Ewa^1,2,3 (AUTHOR), Gabaldón, Toni^1,2,3,4 (AUTHOR) toni.gabaldon@bsc.es

The Amphibian Genomics Consortium: advancing genomic and genetic resources for amphibian research and conservation.

Kosch, Tiffany A.¹ (AUTHOR) tiffany.kosch@gmail.com, Torres-Sánchez, María² (AUTHOR) torressanchez.maria@gmail.com, Liedtke, H. Christoph³ (AUTHOR), Summers, Kyle⁴ (AUTHOR), Yun, Maximina H.^5,6 (AUTHOR), Crawford, Andrew J.^7,8 (AUTHOR), Maddock, Simon T.^9,10 (AUTHOR), Ahammed, Md. Sabbir¹¹ (AUTHOR), Araújo, Victor L. N.⁷ (AUTHOR), Bertola, Lorenzo V.¹² (AUTHOR), Bucciarelli, Gary M.¹³ (AUTHOR), Carné, Albert¹⁴ (AUTHOR), Carneiro, Céline M.¹⁵ (AUTHOR), Chan, Kin O.¹⁶ (AUTHOR), Chen, Ying¹⁷ (AUTHOR), Crottini, Angelica^18,19,20 (AUTHOR), da Silva, Jessica M.^21,22 (AUTHOR), Denton, Robert D.²³ (AUTHOR), Dittrich, Carolin²⁴ (AUTHOR), Espregueira Themudo, Gonçalo²⁵ (AUTHOR)

Rethinking asexuality: the enigmatic case of functional sexual genes in Lepraria (Stereocaulaceae).

Doellman, Meredith M.¹ (AUTHOR), Sun, Yukun¹ (AUTHOR), Barcenas-Peña, Alejandrina¹ (AUTHOR), Lumbsch, H. Thorsten¹ (AUTHOR), Grewe, Felix¹ (AUTHOR) fgrewe@fieldmuseum.org

Comparative Phylogenomic Study of Malaxidinae (Orchidaceae) Sheds Light on Plastome Evolution and Gene Divergence.

Zeng, Meng-Yao¹ (AUTHOR) 62419052001@fafu.edu.cn, Li, Ming-He^1,2 (AUTHOR) fjalmh@fafu.edu.cn, Lan, Siren^1,2 (AUTHOR) lkzx@fafu.edu.cn, Yin, Wei-Lun^1,3 (AUTHOR) yinwl@bjfu.edu.cn, Liu, Zhong-Jian^1,2 (AUTHOR) yinwl@bjfu.edu.cn

Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history.

Mazéas, Lisa¹ (AUTHOR), Bouguerba-Collin, Ahlem¹ (AUTHOR), Cock, J. Mark¹ (AUTHOR), Denoeud, France² (AUTHOR), Godfroy, Olivier¹ (AUTHOR), Brillet-Guéguen, Loraine^1,3 (AUTHOR), Barbeyron, Tristan¹ (AUTHOR), Lipinska, Agnieszka P.⁴ (AUTHOR), Delage, Ludovic¹ (AUTHOR), Corre, Erwan³ (AUTHOR), Drula, Elodie^5,6,7 (AUTHOR), Henrissat, Bernard^5,6,8 (AUTHOR), Czjzek, Mirjam¹ (AUTHOR), Terrapon, Nicolas^5,6 (AUTHOR), Hervé, Cécile¹ (AUTHOR) cecile.herve@sb-roscoff.fr

Methods for Pangenomic Core Detection

Schulz, Tizian^Aff5, Parmigiani, Luca^Aff5, Rempel, Andreas^Aff5, Stoye, Jens^Aff5

Setubal, João Carlos^Aff2, Stadler, Peter F.^Aff3, Stoye, Jens^Aff4, Walker, John M.^Aff1

Multipla: Multiscale Pangenomic Locus Analysis.

van den Brandt, A.^1,2 (AUTHOR), Ståhlbom, E.^3,4 (AUTHOR), van Workum, F.J.M.² (AUTHOR), van de Wetering, H.¹ (AUTHOR), Lundström, C.^3,4,5 (AUTHOR), Smit, S.² (AUTHOR), Vilanova, A.¹ (AUTHOR)

Genomes of diverse Actinidia species provide insights into cis-regulatory motifs and genes associated with critical traits.

Li, Xiaolong^1,2 (AUTHOR), Huo, Liuqing^1,2 (AUTHOR), Li, Xinyi^1,2 (AUTHOR), Zhang, Chaofan³ (AUTHOR), Gu, Miaofeng^1,2 (AUTHOR), Fan, Jialu⁴ (AUTHOR), Xu, Changbin^1,2 (AUTHOR), Gong, Jinli^1,2 (AUTHOR), Hu, Xiaoli^1,2 (AUTHOR), Zheng, Yi⁴ (AUTHOR), Sun, Xuepeng^1,2 (AUTHOR) xs57@zafu.edu.cn

Marine sponge microbe provides insights into evolution and virulence of the tubercle bacillus.

Pidot, Sacha J.¹ (AUTHOR) sacha.pidot@unimelb.edu.au, Klatt, Stephan² (AUTHOR), Ates, Louis S.³ (AUTHOR), Frigui, Wafa³ (AUTHOR), Sayes, Fadel³ (AUTHOR), Majlessi, Laleh³ (AUTHOR), Izumi, Hiroshi⁴ (AUTHOR), Monk, Ian R.¹ (AUTHOR), Porter, Jessica L.¹ (AUTHOR), Bennett-Wood, Vicki¹ (AUTHOR), Seemann, Torsten¹ (AUTHOR), Otter, Ashley⁵ (AUTHOR), Taiaroa, George⁶ (AUTHOR), Cook, Gregory M.⁶ (AUTHOR), West, Nicholas⁴ (AUTHOR), Tobias, Nicholas J.¹ (AUTHOR), Fuerst, John A.⁴ (AUTHOR), Stutz, Michael D.⁷ (AUTHOR), Pellegrini, Marc⁷ (AUTHOR), McConville, Malcolm² (AUTHOR)