Search Results - "Epigenetic"

Epigenetic Suppression of miR-137 Induces RNF4 Expression, Facilitating Wnt Signaling in Colorectal Cancer.

Wu Y; Department of Clinical Laboratory, Shanghai Children's Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.; Department of Laboratory Medicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; Institute of Pediatric Infection, Immunity, and Critical Care Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; College of Health Science and Technology, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; Department of Clinical Laboratory, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China., Li H; Department of Clinical Laboratory, Shanghai Children's Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.; Institute of Pediatric Infection, Immunity, and Critical Care Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; College of Health Science and Technology, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; Department of Clinical Laboratory, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China., Long Y; Department of Clinical Laboratory, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China.; Department of Biochemistry and Molecular Cell Biology, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Key Laboratory of Cell Differentiation and Apoptosis of National Ministry of Education, Shanghai Jiao Tong University School of Medicine, Shanghai, China., Zhang Z; Department of Clinical Laboratory, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China., Zhang F; Department of Clinical Laboratory, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China., Pan R; Department of Clinical Laboratory, Shanghai Children's Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.; Institute of Pediatric Infection, Immunity, and Critical Care Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; College of Health Science and Technology, Shanghai Jiao Tong University School of Medicine, Shanghai, China., Meng L; Department of Clinical Laboratory, Shanghai Children's Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.; Institute of Pediatric Infection, Immunity, and Critical Care Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; College of Health Science and Technology, Shanghai Jiao Tong University School of Medicine, Shanghai, China., Ma Z; Department of Clinical Laboratory, Shanghai Children's Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.; Institute of Pediatric Infection, Immunity, and Critical Care Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, China.; College of Health Science and Technology, Shanghai Jiao Tong University School of Medicine, Shanghai, China., Wang K; Department of Hepatobiliary Surgery, Shanghai East Hospital, School of Medicine, Tongji University, Shanghai, China., Zheng B; Department of Laboratory Medicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China., Qie Z; Department of Clinical Laboratory, Shanghai health and medical center, Wuxi, China., Gao W; Department of General Surgery, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

Journal Article , 2025

A noncanonical role of roX RNAs in autosomal epigenetic repression.

Li J; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.; Faculty of Synthetic Biology, Shenzhen University of Advanced Technology, Shenzhen, China., Xu S; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Liu Z; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.; Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences (RIMLS), Radboud University Nijmegen, Nijmegen, The Netherlands., Yang L; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Ming Z; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.; Faculty of Health Sciences, University of Macau, Macau, Macau SAR, China., Zhang R; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Zhao W; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Peng H; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Quinn JJ; Center for Personal Dynamic Regulomes and Program in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USA., Wu M; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Geng Y; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Zhang Y; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., He J; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Chen M; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Li N; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China., Shao NY; Faculty of Health Sciences, University of Macau, Macau, Macau SAR, China., Ma Q; Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China. qing.ma@siat.ac.cn.

Journal Article , 2025

Adipose tissue retains an epigenetic memory of obesity after weight loss.

Hinte LC; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Biomedicine Programme, Life Science Zurich Graduate School, Zurich, Switzerland., Castellano-Castillo D; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Medical Oncology Department, Virgen de la Victoria University Hospital, Málaga Biomedical Research Institute (IBIMA)-CIMES-UMA, Málaga, Spain., Ghosh A; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Functional Genomics Center Zurich, ETH Zurich and University Zurich, Zurich, Switzerland.; Laboratory of Translational Nutrition Biology, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Melrose K; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Biomedicine Programme, Life Science Zurich Graduate School, Zurich, Switzerland., Gasser E; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Noé F; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Functional Genomics Center Zurich, ETH Zurich and University Zurich, Zurich, Switzerland.; Laboratory of Translational Nutrition Biology, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Massier L; Department of Medicine Huddinge, Karolinska Institutet, Karolinska University Hospital Huddinge, Stockholm, Sweden.; Helmholtz Institute for Metabolic, Obesity and Vascular Research (HI-MAG), Helmholtz Zentrum München, University of Leipzig and University Hospital Leipzig, Leipzig, Germany., Dong H; Laboratory of Translational Nutrition Biology, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Stem Cell Bio Regenerative Med Institute, Stanford University, Stanford, CA, USA., Sun W; Laboratory of Translational Nutrition Biology, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Department of Bioengineering, Stanford University, Stanford, CA, USA., Hoffmann A; Helmholtz Institute for Metabolic, Obesity and Vascular Research (HI-MAG), Helmholtz Zentrum München, University of Leipzig and University Hospital Leipzig, Leipzig, Germany., Wolfrum C; Laboratory of Translational Nutrition Biology, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Rydén M; Department of Medicine Huddinge, Karolinska Institutet, Karolinska University Hospital Huddinge, Stockholm, Sweden., Mejhert N; Department of Medicine Huddinge, Karolinska Institutet, Karolinska University Hospital Huddinge, Stockholm, Sweden., Blüher M; Helmholtz Institute for Metabolic, Obesity and Vascular Research (HI-MAG), Helmholtz Zentrum München, University of Leipzig and University Hospital Leipzig, Leipzig, Germany.; Medical Department III - Endocrinology, Nephrology, Rheumatology, University of Leipzig Medical Center, Leipzig, Germany., von Meyenn F; Laboratory of Nutrition and Metabolic Epigenetics, Institute of Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland. ferdinand.vonmeyenn@hest.ethz.ch.

Journal Article , 2024

Dissecting Mechanisms of Epigenetic Memory Through Computational Modeling.

Briffa A; Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom; email: martin.howard@jic.ac.uk.; Epigenetics Programme, Babraham Institute, Cambridge, United Kingdom., Menon G; Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom; email: martin.howard@jic.ac.uk., Movilla Miangolarra A; Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom; email: martin.howard@jic.ac.uk., Howard M; Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom; email: martin.howard@jic.ac.uk.

Journal Article; Review , 2024

Long non coding RNA function in epigenetic memory with a particular emphasis on genomic imprinting and X chromosome inactivation.

Le LTT; Faculty of Biotechnology, Ho Chi Minh City Open University, Ho Chi Minh City 700000 Viet Nam.

Journal Article; Review , 2025

Persistent epigenetic memory of SARS-CoV-2 mRNA vaccination in monocyte-derived macrophages.

Simonis A; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany.; German Center for Infection Research (DZIF), Partner Site Bonn-Cologne, Cologne, Germany., Theobald SJ; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany.; German Center for Infection Research (DZIF), Partner Site Bonn-Cologne, Cologne, Germany., Koch AE; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany., Mummadavarapu R; Max Planck Research Group 'Chromatin and Ageing', Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, Cologne, 50931, Germany., Mudler JM; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany., Pouikli A; Max Planck Research Group 'Chromatin and Ageing', Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, Cologne, 50931, Germany., Göbel U; Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany., Acton R; Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.; Babraham Institute, Cambridge, UK., Winter S; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany., Albus A; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany., Holzmann D; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany., Albert MC; Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.; Institute of Biochemistry I, Faculty of Medicine, University Hospital Cologne, University of Cologne, Cologne, Germany., Hallek M; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany., Walczak H; Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.; Institute of Biochemistry I, Faculty of Medicine, University Hospital Cologne, University of Cologne, Cologne, Germany.; Center for Cell Death, Cancer and Inflammation, UCL Cancer Institute, University College London, London, United Kingdom., Ulas T; Systems Medicine, German Center for Neurodegenerative Diseases (DZNE), University of Bonn, Bonn, Germany.; PRECISE Plattform for Single Cell Genomics and Epigenomics, DZNE, University of Bonn, Bonn and West German Genome Center, Bonn, Germany.; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany., Koch M; Institute of Biochemistry I, Faculty of Medicine, University Hospital Cologne, University of Cologne, Cologne, Germany.; Institute for Dental Research and Oral Musculoskeletal Biology, Center for Dental, Oral and Maxillofacial Medicine (central facilities), Medical Faculty and University of Cologne, Cologne, Germany., Tessarz P; Max Planck Research Group 'Chromatin and Ageing', Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, Cologne, 50931, Germany.; Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.; Department of Human Biology, Radboud Institute for Molecular Life Sciences, Faculty of Science, Radboud University, Nijmegen, The Netherlands., Hänsel-Hertsch R; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany. robert.haensel-hertsch@uni-koeln.de.; Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany. robert.haensel-hertsch@uni-koeln.de.; Department of Translational Genomics, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany. robert.haensel-hertsch@uni-koeln.de.; Institute of Human Genetics, University Hospital Cologne, Cologne, Germany. robert.haensel-hertsch@uni-koeln.de., Rybniker J; Department I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50937, Germany. jan.rybniker@uk-koeln.de.; Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, 50931, Germany. jan.rybniker@uk-koeln.de.; German Center for Infection Research (DZIF), Partner Site Bonn-Cologne, Cologne, Germany. jan.rybniker@uk-koeln.de.

Journal Article , 2025

Generation of Cell Lines Stably Expressing a dCas9-Fusion or sgRNA to Address Dynamics of Long-Term Effects of Epigenetic Editing

Sarno, Federica^{Aff4, Aff5}, Koncz, Mihaly^{Aff6, Aff7, Aff8}, Eilers, Roos E.^Aff4, Verschure, Pernette J.^{Aff6, Aff9}, Rots, Marianne G.^Aff4

Jeltsch, Albert^Aff2, Rots, Marianne G.^Aff3, Walker, John M.^Aff1

dCas-Based Tools to Visualize Chromatin or Modify Epigenetic Marks at Specific Plant Genomic Loci

Fal, Kateryna^Aff4, Carles, Cristel C.^Aff4

Baroux, Célia^Aff2, Tatout, Christophe^Aff3, Walker, John M.^Aff1

Dual DNA demethylation mechanisms implement epigenetic memory driven by the pioneer factor PAX7.

Harris J; Laboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada., Mayran A; Laboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada., Gouhier A; Laboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada., Gauthier Y; Laboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada., Sleiman NH; Institut de Génomique Fonctionnelle de Lyon, CNRS UMR5242, École Normale Supérieure de Lyon, Université Lyon I, Lyon 69007, France., Merabet S; Institut de Génomique Fonctionnelle de Lyon, CNRS UMR5242, École Normale Supérieure de Lyon, Université Lyon I, Lyon 69007, France., Dukatz M; Department of Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart 70569, Germany., Bashtrykov P; Department of Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart 70569, Germany., Jeltsch A; Department of Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart 70569, Germany., Djambazian H; Victor Phillip Dahdaleh Institute of Genomic Medicine, McGill University, Montréal H3A 0G1, Canada., Chen SH; Victor Phillip Dahdaleh Institute of Genomic Medicine, McGill University, Montréal H3A 0G1, Canada., Balsalobre A; Laboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada., Drouin J; Laboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.

Journal Article , 2025

Crosstalk within and beyond the Polycomb repressive system.

Shi TH; Graduate School of Pharmaceutical Sciences, The University of Tokyo , Tokyo, Japan., Sugishita H; Graduate School of Pharmaceutical Sciences, The University of Tokyo , Tokyo, Japan.; International Research Center for Neurointelligence, The University of Tokyo , Tokyo, Japan., Gotoh Y; Graduate School of Pharmaceutical Sciences, The University of Tokyo , Tokyo, Japan.; International Research Center for Neurointelligence, The University of Tokyo , Tokyo, Japan.

Review; Journal Article; Research Support, Non-U.S. Gov't , 2024

Inheritance of epigenetic transcriptional memory.

Ge T; Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA., Brickner JH; Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA. Electronic address: j-brickner@northwestern.edu.

Journal Article; Review; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't , 2024

Epigenetic regulation and epigenetic memory resetting during plant rejuvenation.

Liu J; State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China., Ke M; State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China., Sun Y; State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China., Niu S; State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China., Zhang W; State Key Laboratory for Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, No.1 Weigang, Nanjing, Jiangsu 210095, PR China., Li Y; State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China.

Review; Journal Article; Research Support, Non-U.S. Gov't , 2024

Cleavage Under Targets and Release Using Nuclease (CUT&RUN) in Macrophages

Babl, Antonia^Aff3, Greulich, Franziska^Aff3

Greulich, Franziska^Aff2, Walker, John M.^Aff1

Measuring B Cell Chromatin Accessibility by One-Step ATAC-seq

Hicks, Sakeenah L.^Aff3, Scharer, Christopher D.^Aff3

Good-Jacobson, Kim L.^Aff2, Walker, John M.^Aff1

Epigenetic memory as crucial contributing factor in directing the differentiation of human iPSC into pancreatic β-cells in vitro.

Diane A; Diabetes Research Center, Qatar Biomedical Research Institute (QBRI), Qatar Foundation (QF), Hamad Bin Khalifa University (HBKU), Doha, Qatar. adiane@hbku.edu.qa., Mu-U-Min RBA; Diabetes Research Center, Qatar Biomedical Research Institute (QBRI), Qatar Foundation (QF), Hamad Bin Khalifa University (HBKU), Doha, Qatar., Al-Siddiqi HH; Diabetes Research Center, Qatar Biomedical Research Institute (QBRI), Qatar Foundation (QF), Hamad Bin Khalifa University (HBKU), Doha, Qatar.

Journal Article; Review , 2025

Disease-associated astrocyte epigenetic memory promotes CNS pathology.

Lee HG; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Rone JM; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Li Z; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Akl CF; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Shin SW; Department of Bioengineering, College of Engineering, California Institute for Quantitative Biosciences, QB3, University of California Berkeley, Berkeley, CA, USA., Lee JH; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Flausino LE; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Pernin F; Neuroimmunology Unit, Montreal Neurological Institute, Department of Neurology and Neurosurgery, McGill University, Montreal, Quebec, Canada., Chao CC; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Kleemann KL; School of Computing, University of Portsmouth, Portsmouth, UK., Srun L; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Illouz T; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Giovannoni F; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Charabati M; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Sanmarco LM; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Kenison JE; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Piester G; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.; Department of Pathology and Laboratory Medicine, University of Rochester Medical Center, Rochester, NY, USA., Zandee SEJ; Neuroimmunology Research Lab, Centre de Recherche du Centre Hospitalier de l'Université de Montréal (CRCHUM), Montreal, Quebec, Canada., Antel JP; Neuroimmunology Unit, Montreal Neurological Institute, Department of Neurology and Neurosurgery, McGill University, Montreal, Quebec, Canada., Rothhammer V; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.; Department of Neurology, University Hospital, Friedrich-Alexander University Erlangen Nuremberg, Erlangen, Germany., Wheeler MA; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Prat A; Neuroimmunology Research Lab, Centre de Recherche du Centre Hospitalier de l'Université de Montréal (CRCHUM), Montreal, Quebec, Canada., Clark IC; Department of Bioengineering, College of Engineering, California Institute for Quantitative Biosciences, QB3, University of California Berkeley, Berkeley, CA, USA., Quintana FJ; Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA. fquintana@rics.bwh.harvard.edu.; Broad Institute of MIT and Harvard, Cambridge, MA, USA. fquintana@rics.bwh.harvard.edu.; Gene Lay Institute of Immunology and Inflammation, Boston, MA, USA. fquintana@rics.bwh.harvard.edu.

Journal Article , 2024

Epigenetic memory.

Brewer G; Nature Reviews Cancer, . nrc@nature.com.

Journal Article , 2024

Polysaccharide of Asparagus cochinchinensis (Lour.) Merr regulates macrophage immune response and epigenetic memory through TLR4-JNK/p38/ERK signaling pathway and histone modification.

Xie XD; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., Tang M; Department of Clinical Laboratory, Xinqiao Hospital, Army Medical University, Chongqing 400037, China., Yi SL; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., He Y; Guangxi Veterinary Research Institute, Nanning 530005, China., Chen SY; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., Zhao Y; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., Chen Q; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., Cao MX; College of Animal Science, Anhui Science and Technology University, Chuzhou 233100, China., Yu ML; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., Wei YY; College of Animal Science and Technology, Guangxi University, Nanning 530005, China., Yu WH; Guang xi Academy of Agricultural Science, Biotechnology Research Institute, Nanning 530007, China. Electronic address: yuweihua-nn@126.com., Hu TJ; College of Animal Science and Technology, Guangxi University, Nanning 530005, China. Electronic address: tingjunhu@gxu.edu.cn.

Journal Article , 2024

Moving epigenetic inheritance into the space age: Evidence that 3D genome organization is required for the establishment of epigenetic memory.

Hawes JJ; School of Life and Environmental Sciences, Charles Perkins Centre, University of Sydney, NSW 2006, Australia., Ashe A; School of Life and Environmental Sciences, Charles Perkins Centre, University of Sydney, NSW 2006, Australia. Electronic address: alyson.ashe@sydney.edu.au.

Journal Article; Comment , 2025

Epigenetic memory of temperature sensed during somatic embryo maturation in 2-yr-old maritime pine trees.

Trontin JF; BioForBois, FCBA, Pôle Industrie Bois & Construction, Cestas 33610, France., Sow MD; P2e, Université d'Orléans, INRAE, EA 1207 USC 1328, Orléans 45067, France., Delaunay A; P2e, Université d'Orléans, INRAE, EA 1207 USC 1328, Orléans 45067, France., Modesto I; Faculdade de Ciências, Biosystems and Integrative Sciences Institute, Universidade de Lisboa, Lisboa 1749-016, Portugal., Teyssier C; BioForA, INRAE, ONF, UMR 0588, Orléans 45075, France., Reymond I; BioForBois, FCBA, Pôle Industrie Bois & Construction, Cestas 33610, France., Canlet F; Sylviculture Avancée, FCBA, Pôle Ressources Forestières des Territoires, Cestas 33610, France., Boizot N; BioForA, INRAE, ONF, UMR 0588, Orléans 45075, France., Le Metté C; BioForA, INRAE, ONF, UMR 0588, Orléans 45075, France., Gibert A; P2e, Université d'Orléans, INRAE, EA 1207 USC 1328, Orléans 45067, France., Chaparro C; IHPE, Université de Perpignan, UMR 5244, Perpignan 66100, France., Daviaud C; Laboratory for Epigenetics and Environment, Centre National de Recherche en Génomique Humaine, CEA-Institut de Biologie François Jacob, Université Paris Saclay, Evry 91000, France., Tost J; Laboratory for Epigenetics and Environment, Centre National de Recherche en Génomique Humaine, CEA-Institut de Biologie François Jacob, Université Paris Saclay, Evry 91000, France., Miguel C; Faculdade de Ciências, Biosystems and Integrative Sciences Institute, Universidade de Lisboa, Lisboa 1749-016, Portugal., Lelu-Walter MA; BioForA, INRAE, ONF, UMR 0588, Orléans 45075, France., Maury S; P2e, Université d'Orléans, INRAE, EA 1207 USC 1328, Orléans 45067, France.

Journal Article , 2025