Search Results - "Myvizhi, M."

Single-Valued Neutrosophic Graph with Heptapartitioend Structure.

fathi, Hanaa¹, Myvizhi, M.², Abdelhafeez, Ahmed^3,4 aahafeez.scis@o6u.edu.eg, Abdellah, Mohamed Refaat⁵, Eassa, Mohamed^3,4, Sawah, Mohamed S.⁶, Elbehiery, Hussam³

Enhanced MADM Strategy with Heptapartitioned Neutrosophic Distance Metrics.

Eassa, Mohamed^1,2 mohamed.eassa.cs@o6u.edu.eg, Myvizhi, M.³ myvizhi.m@kpriet.ac.in, Elkholy, Mohamed⁴ melkholy@aiu.edu.eg, Abdelhafeez, Ahmed^1,2 aahafeez.scis@o6u.edu.eg, Elbehiery, Hussam¹ H.elbehiry.csis@o6u.edu.eg

TreeSoft Approach for Refining Air Pollution Analysis: A Case Study.

Myvizhi, M.¹ myvizhi.m@kpriet.ac.in, Metwaly, Ahmed A.² a.metwaly23@fci.zu.edu.eg, Ali, Ahmed M.² aabdelmonem@fci.zu.eg

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Structure and opto-electronic properties of MgO nanocrystals calculated by GGA approximation.

Myvizhi, M.¹, Kumar, K. V. Satheesh², Kavitha, P. R.³, Selvakumar, P.⁴ selvakumarpresec@gmail.com

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Precision proteogenomics reveals pan-cancer impact of germline variants.

Martins Rodrigues F; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Terekhanova NV; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Imbach KJ; Josep Carreras Leukaemia Research Institute (IJC), Badalona, Barcelona, Spain; Universitat Autonoma de Barcelona, Barcelona, Spain., Clauser KR; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Esai Selvan M; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Mendizabal I; Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Spain; Ikerbasque, Basque Foundation for Science, Bilbao, Spain; Translational Prostate Cancer Research Lab, CIC bioGUNE-Basurto, Biocruces Bizkaia Health Research Institute, Derio, Spain., Geffen Y; Broad Institute of MIT and Harvard, Cambridge, MA, USA; Cancer Center and Department of Pathology, Massachusetts General Hospital, Boston, MA, USA., Akiyama Y; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Maynard M; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Yaron TM; Meyer Cancer Center, Department of Medicine, Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA., Li Y; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Cao S; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Storrs EP; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Gonda OS; Department of Biology, Brigham Young University, Salt Lake City, UT, USA., Gaite-Reguero A; Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Spain., Govindan A; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Kawaler EA; Applied Bioinformatics Laboratories, New York University Langone Health, New York City, NY, USA., Wyczalkowski MA; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA., Klein RJ; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Turhan B; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Krug K; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Mani DR; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Leprevost FDV; Department of Pathology, University of Michigan, Ann Arbor, MI, USA., Nesvizhskii AI; Department of Pathology, University of Michigan, Ann Arbor, MI, USA; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA., Carr SA; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Fenyö D; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY, USA., Gillette MA; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Colaprico A; Department of Public Health Sciences, University of Miami Miller School of Medicine, Miami, FL, USA; Sylvester Comprehensive Cancer Center, University of Miami Miller School of Medicine, Miami, FL, USA., Iavarone A; Sylvester Comprehensive Cancer Center, University of Miami Miller School of Medicine, Miami, FL, USA; Department of Neurological Surgery, Department of Biochemistry and Molecular Biology, University of Miami, Miller School of Medicine, Miami, FL, USA., Robles AI; Office of Cancer Clinical Proteomics Research, National Cancer Institute, Rockville, MD, USA., Huang KL; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Center for Transformative Disease Modeling, Tisch Cancer Institute, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Kumar-Sinha C; Department of Pathology, University of Michigan, Ann Arbor, MI, USA; Michigan Center for Translational Pathology, University of Michigan, Ann Arbor, MI, USA., Aguet F; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Lazar AJ; Departments of Pathology and Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, USA., Cantley LC; Dana Farber Cancer Institute, Boston, MA, USA., Marigorta UM; Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Spain; Ikerbasque, Basque Foundation for Science, Bilbao, Spain., Gümüş ZH; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: zeynep.gumus@mssm.edu., Bailey MH; Department of Biology, Brigham Young University, Salt Lake City, UT, USA. Electronic address: matthew.bailey@byu.edu., Getz G; Broad Institute of MIT and Harvard, Cambridge, MA, USA; Cancer Center and Department of Pathology, Massachusetts General Hospital, Boston, MA, USA; Harvard Medical School, Boston, MA, USA. Electronic address: gadgetz@broadinstitute.org., Porta-Pardo E; Josep Carreras Leukaemia Research Institute (IJC), Badalona, Barcelona, Spain; Barcelona Supercomputing Center (BSC), Barcelona, Spain. Electronic address: eporta@carrerasresearch.org., Ding L; Department of Medicine, Washington University in St. Louis, Saint Louis, MO, USA; McDonnell Genome Institute, Washington University in St. Louis, Saint Louis, MO, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, Saint Louis, MO, USA. Electronic address: lding@wustl.edu.

Clinical Proteomic Tumor Analysis Consortium

Journal Article , 2025

Clonal Hematopoiesis of Indeterminate Potential in Crohn's Disease and Ulcerative Colitis.

Esai Selvan M; Department of Genetics and Genomics, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1498, New York, NY 10029, USA., Nathan DI; Tisch Cancer Institute, Division of Hematology and Medical Oncology, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1079, New York, NY 10029, USA., Guisado D; Division of Pediatric Gastroenterology, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1069, New York, NY 10029, USA., Collatuzzo G; Department of Medical and Surgical Sciences, University of Bologna, Via Zamboni, 33 - 40126, Bologna, Italy., Iruvanti S; Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1498, New York, NY 10029, USA., Boffetta P; Department of Medical and Surgical Sciences, University of Bologna, Via Zamboni, 33 - 40126, Bologna, Italy.; Stony Brook Department of Family, Population and Preventive Medicine, Renaissance School of Medicine, 101 Nicolls Road Health Sciences Center, Level 4, Stony Brook, NY 11794,  USA., Mascarenhas J; Tisch Cancer Institute, Division of Hematology and Medical Oncology, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1079, New York, NY 10029, USA., Hoffman R; Tisch Cancer Institute, Division of Hematology and Medical Oncology, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1079, New York, NY 10029, USA., Cohen LJ; Division of Gastroenterology, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1069, New York, NY 10029, USA., Marcellino BK; Tisch Cancer Institute, Division of Hematology and Medical Oncology, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1079, New York, NY 10029, USA., Gümüş ZH; Department of Genetics and Genomics, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1498, New York, NY 10029, USA.; Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, Box 1630, New York, NY 10029, USA.

Journal Article , 2025

Proteogenomic data and resources for pan-cancer analysis.

Li Y; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Dou Y; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Da Veiga Leprevost F; Department of Pathology, University of Michigan, Ann Arbor, MI 48109, USA., Geffen Y; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Calinawan AP; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Aguet F; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Akiyama Y; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Anand S; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Birger C; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Cao S; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Chaudhary R; ICF, Rockville, MD 20850, USA., Chilappagari P; ICF, Rockville, MD 20850, USA., Cieslik M; Department of Computational Medicine & Bioinformatics, Department of Pathology, University of Michigan Medical School, Ann Arbor, MI 48109, USA., Colaprico A; Department of Public Health Sciences, University of Miami Miller School of Medicine, Miami, FL 33136, USA; Sylvester Comprehensive Cancer Center, University of Miami Miller School of Medicine, Miami, FL 33136, USA., Zhou DC; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Day C; Department of Biology, Brigham Young University, Provo, UT 84602, USA., Domagalski MJ; ICF, Rockville, MD 20850, USA., Esai Selvan M; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Fenyö D; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA., Foltz SM; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Francis A; ICF, Rockville, MD 20850, USA., Gonzalez-Robles T; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Medicine, NYU Grossman School of Medicine, New York, NY 10016, USA., Gümüş ZH; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Heiman D; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Holck M; ICF, Rockville, MD 20850, USA., Hong R; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA., Hu Y; Department of Pathology, Johns Hopkins University, Baltimore, MD 21231, USA., Jaehnig EJ; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Ji J; Tisch Cancer Institute and Department of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Jiang W; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Katsnelson L; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA., Ketchum KA; ICF, Rockville, MD 20850, USA., Klein RJ; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Lei JT; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Liang WW; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Liao Y; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Lindgren CM; Department of Biology, Brigham Young University, Provo, UT 84602, USA., Ma W; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Ma L; ICF, Rockville, MD 20850, USA., MacCoss MJ; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Martins Rodrigues F; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., McKerrow W; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA., Nguyen N; ICF, Rockville, MD 20850, USA., Oldroyd R; Department of Biology, Brigham Young University, Provo, UT 84602, USA., Pilozzi A; ICF, Rockville, MD 20850, USA., Pugliese P; Department of Sciences and Technologies, University of Sannio, Benevento 82100, Italy., Reva B; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Rudnick P; Spectragen Informatics, Bainbridge Island, WA 98110, USA., Ruggles KV; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Medicine, NYU Grossman School of Medicine, New York, NY 10016, USA., Rykunov D; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Savage SR; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Schnaubelt M; Department of Pathology, Johns Hopkins University, Baltimore, MD 21231, USA., Schraink T; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Medicine, NYU Grossman School of Medicine, New York, NY 10016, USA., Shi Z; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Singhal D; ICF, Rockville, MD 20850, USA., Song X; Tisch Cancer Institute and Department of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Storrs E; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Terekhanova NV; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Thangudu RR; ICF, Rockville, MD 20850, USA., Thiagarajan M; Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA., Wang LB; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Wang JM; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA., Wang Y; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY 10016, USA., Wen B; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Wu Y; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Wyczalkowski MA; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Xin Y; ICF, Rockville, MD 20850, USA., Yao L; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA., Yi X; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Zhang H; Department of Pathology, Johns Hopkins University, Baltimore, MD 21231, USA., Zhang Q; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA., Zuhl M; ICF, Rockville, MD 20850, USA., Getz G; Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA; Cancer Center and Department of Pathology, Mass. General Hospital, Boston, MA 02114, USA; Harvard Medical School, Boston, MA 02115, USA., Ding L; Department of Medicine, Washington University in St. Louis, St. Louis, MO 63130, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63130, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63130, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63130, USA., Nesvizhskii AI; Department of Pathology, University of Michigan, Ann Arbor, MI 48109, USA., Wang P; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Robles AI; Office of Cancer Clinical Proteomics Research, National Cancer Institute, Rockville, MD 20850, USA. Electronic address: roblesa@mail.nih.gov., Zhang B; Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: bing.zhang@bcm.edu., Payne SH; Department of Biology, Brigham Young University, Provo, UT 84602, USA. Electronic address: sam_payne@byu.edu.

Clinical Proteomic Tumor Analysis Consortium

Journal Article; Review; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't , 2023

Germline rare deleterious variant load alters cancer risk, age of onset and tumor characteristics.

Esai Selvan M; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA., Onel K; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA., Gnjatic S; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.; Oncological Sciences, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA., Klein RJ; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA., Gümüş ZH; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA. zeynep.gumus@mssm.edu.; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA. zeynep.gumus@mssm.edu.; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA. zeynep.gumus@mssm.edu.

Journal Article , 2023

Germline Pathogenic Variants Impact Clinicopathology of Advanced Lung Cancer.

Mukherjee S; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Bandlamudi C; Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York., Hellmann MD; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Kemel Y; Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York., Drill E; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York., Rizvi H; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Tkachuk K; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Khurram A; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Walsh MF; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Zauderer MG; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Mandelker D; Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center New York, New York., Topka S; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York., Zehir A; Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center New York, New York., Srinivasan P; Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York., Esai Selvan M; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York.; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, New York.; Department of Psychiatry and Behavioral Sciences, Memorial Sloan Kettering Cancer Center, New York., Carlo MI; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Cadoo KA; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Latham A; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Hamilton JG; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; University of Birmingham, United Kingdom., Liu YL; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Lipkin SM; Department of Medicine, Weill Cornell Medicine, New York, New York., Belhadj S; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Bond GL; The Institute for Clinical and Translational Research, Baylor College of Medicine, Houston, Texas, United States of America., Gümüş ZH; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York.; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, New York.; Department of Psychiatry and Behavioral Sciences, Memorial Sloan Kettering Cancer Center, New York., Klein RJ; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York., Ladanyi M; Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center New York, New York., Solit DB; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York.; Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York., Robson ME; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Jones DR; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Kris MG; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York., Vijai J; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York.; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York., Stadler ZK; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York., Amos CI; The Institute for Clinical and Translational Research, Baylor College of Medicine, Houston, Texas, United States of America., Taylor BS; Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York.; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York.; Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center., Berger MF; Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York.; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York.; Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center., Rudin CM; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York.; Molecular Pharmacology Program, Memorial Sloan Kettering Cancer Center., Offit K; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York.; Department of Medicine, Weill Cornell Medicine, New York, New York.; Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center New York, New York.

Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't , 2022

Generation of TRAIL-resistant cell line models reveals distinct adaptive mechanisms for acquired resistance and re-sensitization.

Cingöz A; Brain Cancer Research and Therapy Laboratory, Koç University Research Center for Translational Medicine, Istanbul, 34450, Turkey.; Koç University School of Medicine, Istanbul, 34450, Turkey., Ozyerli-Goknar E; Brain Cancer Research and Therapy Laboratory, Koç University Research Center for Translational Medicine, Istanbul, 34450, Turkey.; Koç University School of Medicine, Istanbul, 34450, Turkey., Morova T; Koç University School of Medicine, Istanbul, 34450, Turkey., Seker-Polat F; Brain Cancer Research and Therapy Laboratory, Koç University Research Center for Translational Medicine, Istanbul, 34450, Turkey.; Koç University School of Medicine, Istanbul, 34450, Turkey., Esai Selvan M; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA., Gümüş ZH; Koç University School of Medicine, Istanbul, 34450, Turkey.; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA., Bhere D; Center for Stem Cell Therapeutics and Imaging, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA., Shah K; Center for Stem Cell Therapeutics and Imaging, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA., Solaroglu I; Koç University School of Medicine, Istanbul, 34450, Turkey.; Department of Neurosurgery, Koç University School of Medicine, Istanbul, 34010, Turkey., Bagci-Onder T; Brain Cancer Research and Therapy Laboratory, Koç University Research Center for Translational Medicine, Istanbul, 34450, Turkey. tuonder@ku.edu.tr.; Koç University School of Medicine, Istanbul, 34450, Turkey. tuonder@ku.edu.tr.

Journal Article , 2021

Functional Common and Rare ERBB2 Germline Variants Cooperate in Familial and Sporadic Cancer Susceptibility.

Bao R; Hillman Cancer Center, UPMC, Pittsburgh, Pennsylvania.; Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania., Ng A; The Feinstein Institute for Medical Research, Manhasset, New York., Sasaki M; Department of Pediatrics, The University of Chicago, Chicago, Illinois., Esai Selvan M; The Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York.; Center for Research Informatics, The University of Chicago, Chicago, Illinois., Katti A; Department of Pediatrics, The University of Chicago, Chicago, Illinois., Lee H; Department of Pediatrics, The University of Chicago, Chicago, Illinois., Huang L; Department of Genetics and Genomic Sciences Icahn School of Medicine at Mount Sinai, New York, New York., Skol AD; Department of Pediatrics, The University of Chicago, Chicago, Illinois., Lavarino C; Pediatric Cancer Center Barcelona (PCCB), Hospital Sant Joan de Déu, Barcelona, Spain., Salvador H; Pediatric Cancer Center Barcelona (PCCB), Hospital Sant Joan de Déu, Barcelona, Spain., Klein RJ; The Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York.; Center for Research Informatics, The University of Chicago, Chicago, Illinois., Gümüş ZH; The Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York.; Center for Research Informatics, The University of Chicago, Chicago, Illinois., Mora J; Pediatric Cancer Center Barcelona (PCCB), Hospital Sant Joan de Déu, Barcelona, Spain., Onel K; The Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York. kenan.onel@mssm.edu.; Center for Research Informatics, The University of Chicago, Chicago, Illinois.

Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't , 2021

Inherited Rare, Deleterious Variants in ATM Increase Lung Adenocarcinoma Risk.

Esai Selvan M; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York., Zauderer MG; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York., Rudin CM; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York., Jones S; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Mukherjee S; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York., Offit K; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York., Onel K; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York., Rennert G; Department of Community Medicine and Epidemiology, Carmel Medical Center, Clalit National Israeli Cancer Control Center, Haifa, Israel., Velculescu VE; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Lipkin SM; Departments of Medicine and Genetic Medicine, Weill Cornell Medical College, New York, New York., Klein RJ; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York., Gümüş ZH; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York; Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, New York. Electronic address: zeynep.gumus@mssm.edu.

Journal Article; Research Support, Non-U.S. Gov't , 2020

Risk factors for death from COVID-19.

Esai Selvan M; Sinai Immunology Review Project, Icahn School of Medicine at Mount Sinai, New York, NY, USA. sinai.immunology@gmail.com.

Journal Article , 2020

Publisher Correction: Risk factors for death from COVID-19.

Esai Selvan M; Sinai Immunology Review Project, Icahn School of Medicine at Mount Sinai, New York, NY, USA. sinai.immunology@gmail.com.

Journal Article; Published Erratum , 2020

Immunology of COVID-19: Current State of the Science.

Vabret N; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: nicolas.vabret@mssm.edu., Britton GJ; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Gruber C; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Hegde S; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Kim J; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Kuksin M; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Levantovsky R; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Malle L; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Moreira A; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Park MD; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Pia L; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Risson E; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Saffern M; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Salomé B; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Esai Selvan M; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Spindler MP; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Tan J; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., van der Heide V; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Gregory JK; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Alexandropoulos K; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Bhardwaj N; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Brown BD; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Greenbaum B; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Gümüş ZH; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Homann D; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Horowitz A; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Kamphorst AO; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Curotto de Lafaille MA; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Mehandru S; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA., Merad M; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: miriam.merad@mssm.edu., Samstein RM; Precision Immunology Institute at the Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: robert.samstein@mountsinai.org.

Sinai Immunology Review Project

Journal Article; Research Support, N.I.H., Extramural; Review , 2020

Identification of SERPINE1 as a Regulator of Glioblastoma Cell Dispersal with Transcriptome Profiling.

Seker F; Brain Cancer Research and Therapy Laboratory, Koç University School of Medicine, Istanbul 34450, Turkey., Cingoz A; Brain Cancer Research and Therapy Laboratory, Koç University School of Medicine, Istanbul 34450, Turkey., Sur-Erdem İ; Brain Cancer Research and Therapy Laboratory, Koç University School of Medicine, Istanbul 34450, Turkey., Erguder N; Brain Cancer Research and Therapy Laboratory, Koç University School of Medicine, Istanbul 34450, Turkey., Erkent A; Brain Cancer Research and Therapy Laboratory, Koç University School of Medicine, Istanbul 34450, Turkey., Uyulur F; Department of Computational Biology, Koç University, Istanbul 34450, Turkey., Esai Selvan M; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Icahn Institute for Data Science and Genomic Technology, New York, NY 10029, USA., Gümüş ZH; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Icahn Institute for Data Science and Genomic Technology, New York, NY 10029, USA., Gönen M; Department of Industrial Engineering, College of Engineering, Koç University, Istanbul 34450, Turkey., Bayraktar H; Department of Molecular Biology and Genetics, Istanbul Technical University, Istanbul 34467, Turkey., Wakimoto H; Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA., Bagci-Onder T; Brain Cancer Research and Therapy Laboratory, Koç University School of Medicine, Istanbul 34450, Turkey.

Journal Article , 2019

Rare, Pathogenic Germline Variants in Fanconi Anemia Genes Increase Risk for Squamous Lung Cancer.

Esai Selvan M; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.; Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York., Klein RJ; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.; Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York., Gümüş ZH; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York. zeynep.gumus@mssm.edu.; Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York.

Journal Article; Research Support, Non-U.S. Gov't , 2019