Sökresultat - "RNA-sequencing"

Quantifying Nascent Transcription in Early Embryogenesis

Chen, Hui^Aff3

Good, Matthew C.^Aff2, Walker, John M.^Aff1

RNA Extraction Using Trizol (6-Well Plate Method)

Arunachalam, Karuppusamy^Aff3, Sreeja, Puthanpura Sasidharan^Aff4, Arunachalam, Karuppusamy^Aff1, Sreeja, Puthanpura Sasidharan^Aff2

Deconvolving Bulk Transcriptomics Samples to Obtain Cell Type Proportion Estimates

Menon, Vilas^Aff4

Raghavachari, Nalini^Aff2, Garcia-Reyero, Natalia^Aff3, Walker, John M.^Aff1

Detection of Plant Viruses Through RNA-Seq

Meghanath, Dasari^Aff7, Wani, Sumiah^Aff11, Sushma, Kottam^Aff8, Thulasi, Rao^Aff9, Iralu, Nulevino^Aff7, Hamid, Aflaq^Aff10

Hamid, Aflaq^Aff1, Ali, Gowhar^Aff2, Shikari, Asif^Aff3, Saleem, Sahar^Aff4, Wani, Shabir Hussain^Aff5, Wani, Sumiah^Aff6

Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM)

Cheung, Giselle^Aff4, Pauler, Florian M.^Aff4, Hippenmeyer, Simon^Aff4

García-Marqués, Jorge^Aff2, Lee, Tzumin^Aff3, Walker, John M.^Aff1

Uncovering dendritic cell specific biomarkers for diagnosis and prognosis of cardiomyopathy using single cell RNA sequencing and comprehensive bioinformatics analysis.

Rahman, Md. Mizanur^1,2 (AUTHOR), Rahman, Md Habibur^1,2 (AUTHOR) habib@iu.ac.bd, Hossain, Md. Arju³ (AUTHOR), Islam, Kh Mujahidul^1,2 (AUTHOR), Apu, Prosenjit Saha^1,2 (AUTHOR), Khan, Mahfuj^1,2 (AUTHOR), Kibria, Md Golam⁴ (AUTHOR), Ansari, Siddique Akber⁵ (AUTHOR), Humayoo, Mahammad⁶ (AUTHOR) mahammad.humayoo@pu.edu.np

Enhancing radiosensitivity of osteosarcoma by ITGB3 knockdown: a mechanism linked to enhanced osteogenic differentiation status through JNK/c-JUN/RUNX2 pathway activation.

Lian, Qiujian^1,2 (AUTHOR), Liu, Hu³ (AUTHOR), Li, Jingyan⁴ (AUTHOR), Luo, Cheng² (AUTHOR), Liu, Chang⁵ (AUTHOR), Zhao, Haonan² (AUTHOR), Dai, Peijun² (AUTHOR), Wang, Bingxuan² (AUTHOR), Zhou, Huipeng² (AUTHOR), Jiang, Xin⁶ (AUTHOR) drxjiang@126.com, Wang, Zhiwei² (AUTHOR) wang123@smmu.edu.cn, Qiao, Suchi² (AUTHOR) su-chi@163.com

M-band wavelet-based multi-view clustering of cells.

Liu, Tong¹ (AUTHOR), Liu, Zihuan² (AUTHOR), Sun, Wenke³ (AUTHOR), Shankar, Adeethyia⁴ (AUTHOR), Zhao, Yongzhong⁵ (AUTHOR) zhaoy@iscb.org, Wang, Xiaodi⁶ (AUTHOR) zhaoy@iscb.org

Single Cell RNA Sequencing of Papillary Cancer Mesenchymal Stem/Stromal Cells Reveals a Transcriptional Profile That Supports a Role for These Cells in Cancer Progression.

Jandu, Danny¹ (AUTHOR), Latar, Nani^1,2 (AUTHOR), Bajrami, Artida^1,3 (AUTHOR), Queen, Rachel^1,4 (AUTHOR), Hasoon, Megan^3,5 (AUTHOR), Teasdale, Matthew^1,4 (AUTHOR), Hussain, Rafiqul^1,2 (AUTHOR), Coxhead, Jonathan^1,3 (AUTHOR), Aspinall, Sebastian^4,5 (AUTHOR), Meeson, Annette^1,5 (AUTHOR) annette.meeson@ncl.ac.uk

Replicability of bulk RNA-Seq differential expression and enrichment analysis results for small cohort sizes.

Degen, Peter Methys^1,2,3 (AUTHOR) peter.methys@proton.me, Medo, Matúš^1,2 (AUTHOR)

A Transfer Learning Framework for Predicting and Interpreting Drug Responses via Single-Cell RNA-Seq Data.

He, Yujie¹ (AUTHOR), Li, Shenghao^1,2 (AUTHOR), Lan, Hao¹ (AUTHOR), Long, Wulin^1,2 (AUTHOR), Zhai, Shengqiu¹ (AUTHOR), Li, Menglong¹ (AUTHOR), Wen, Zhining^1,2 (AUTHOR) w_zhining@scu.edu.cn

Exosomal microRNA from Plasma in Patients with Pseudoexfoliation Glaucoma of Korea.

An, Hyo Jung^1,2 (AUTHOR), Song, Dae Hyun^1,2 (AUTHOR), Kee, Changwon³ (AUTHOR), Cho, Hyun-kyung^2,4 (AUTHOR)

New Insights and Implications of Cell–Cell Interactions in Developmental Biology.

Wu, Guanhao¹ (AUTHOR), Liang, Yuchao¹ (AUTHOR), Xi, Qilemuge¹ (AUTHOR), Zuo, Yongchun (AUTHOR) yczuo@imu.edu.cn

gneSeqCOO: a novel method for classifying diffuse large B-cell lymphoma cell of origin based on bulk tumor RNA sequencing profiles.

Harris, Will¹ (AUTHOR), Cao, Yi¹ (AUTHOR), Morschhauser, Franck² (AUTHOR), Salles, Gilles³ (AUTHOR), Jiang, Yanwen¹ (AUTHOR), Bottos, Alessia⁴ (AUTHOR), Lenz, Georg⁵ (AUTHOR), Bolen, Christopher R.¹ (AUTHOR) bolen.christopher@gene.com

Intrauterine infusion of autologous endometrial stem cells for the treatment of moderate and severe intrauterine adhesions: a before-and-after study.

Peng, Enuo^1,2 (AUTHOR), Zeng, Yayue² (AUTHOR), He, Da² (AUTHOR), Tan, Xiaojun² (AUTHOR), Xu, Dabao¹ (AUTHOR) dabaoxu2022@163.com, Zhao, Xingping^1,3,4 (AUTHOR) zxp8846@126.com

Development of a hypoxia-responsive macrophage prognostic model using single-cell and bulk RNA sequencing in pancreatic cancer.

Ge, Heming¹ (AUTHOR), Wolters-Eisfeld, Gerrit¹ (AUTHOR), Hackert, Thilo¹ (AUTHOR), Li, Yuqiang² (AUTHOR), Güngör, Cenap¹ (AUTHOR) c.guengoer@uke.de

scPEDSSC: proximity enhanced deep sparse subspace clustering method for scRNA-seq data.

Wei, Xiaopeng^1,2 (AUTHOR), Wu, Jingli^1,2,3 (AUTHOR) wjlhappy@mailbox.gxnu.edu.cn, Li, Gaoshi^1,2 (AUTHOR), Liu, Jiafei^1,2 (AUTHOR), Wu, Xi^1,2 (AUTHOR), He, Chang^1,2 (AUTHOR)

Metagenomic analysis evidences a core virome in Anopheles darlingi from three contrasting Colombian ecoregions.

Hernandez-Valencia, Juan C.¹ (AUTHOR), Gómez, Giovan F.² (AUTHOR), Correa, Margarita M.¹ (AUTHOR) margarita.correao@udea.edu.co

An updated comparison of microarray and RNA-seq for concentration response transcriptomic study: case studies with two cannabinoids, cannabichromene and cannabinol.

Gao, Xiugong¹ (AUTHOR) xiugong.gao@fda.hhs.gov, Yourick, Miranda R.¹ (AUTHOR), Campasino, Kayla¹ (AUTHOR), Zhao, Yang¹ (AUTHOR), Sepehr, Estatira¹ (AUTHOR), Vaught, Cory¹ (AUTHOR), Sprando, Robert L.¹ (AUTHOR), Yourick, Jeffrey J.¹ (AUTHOR)

Identifying PSIP1 as a critical R-loop regulator in osteosarcoma via machine-learning and multi-omics analysis.

Nie, Jiangbo^1,2,3 (AUTHOR), Wang, Shijiang^2,3 (AUTHOR), Zhong, Yanxin^2,3 (AUTHOR), Yang, Feng^2,3 (AUTHOR), Liu, Jiaming^2,3 (AUTHOR), Liu, Zhili^1,2,3 (AUTHOR) zhili-liu@ncu.edu.cn