Search Results - "single‐cell transcriptomics"

Paired Single-Cell Transcriptome and DNA Barcode Detection in Zebrafish Using ScarTrace

Baron, Chloé S.^{Aff4, Aff5}, Alemany, Anna^{Aff6, Aff7}

García-Marqués, Jorge^Aff2, Lee, Tzumin^Aff3, Walker, John M.^Aff1

Single Cell Transcriptome Analysis During Development in Dictyostelium

Antolović, Vlatka^Aff3, Chubb, Jonathan R.^Aff3

Kimmel, Alan R.^Aff2, Walker, John M.^Aff1

Analysis and Visualization of Single-Cell Sequencing Data with Scanpy and MetaCell: A Tutorial

Li, Yanjun^{Aff3, Aff4}, Sun, Chaoyue^Aff5, Romanova, Daria Y.^Aff6, Wu, Dapeng O.^Aff7, Fang, Ruogu^{Aff5, Aff8, Aff9}, Moroz, Leonid L.^{Aff10, Aff11}

Moroz, Leonid L.^Aff2, Walker, John M.^Aff1

Protocol for Classification Single-Cell PBMC Types from Pathological Samples Using Supervised Machine Learning

Lyu, Minjie^Aff3, Xin, Lin^Aff3, Jin, Huan^Aff3, Chitkushev, Lou T.^Aff4, Zhang, Guanglan^Aff4, Keskin, Derin B.^Aff5, Brusic, Vladimir^Aff3

Reche, Pedro A.^Aff2, Walker, John M.^Aff1

scCADE: A Superior Tool for Predicting Perturbation Responses in Single-Cell Gene Expression Using Contrastive Learning and Attention Mechanisms

Ou, Jingfeng, Li, Jiawei, Xia, Zhiliang, Dai, Shurui, Ding, Yulian, Guo, Yan, Jiang, Limin, Tang, Jijun

2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Lineage Tracing by Single-Cell Transcriptomics Decoding Dynamics of Lineage Commitment

Yu, Ping^Aff3, Cheng, Lin^Aff3

Turksen, Kursad^Aff2, Walker, John M.^Aff1

Plant Single-Cell/Nucleus RNA-seq Workflow

Thibivilliers, Sandra^Aff4, Farmer, Andrew^Aff5, Schroeder, Susan^{Aff6, Aff7}, Libault, Marc^{Aff4, Aff8}

Calogero, Raffaele A.^Aff2, Benes, Vladimir^Aff3, Walker, John M.^Aff1

Large-Scale Single-Nucleus RNA Sequencing Compatible with Complex Archived Samples

Liu, Chao-Yu^Aff4, Chen, Hsu-Hsin^Aff5

Tsang, Stephen H.^Aff2, Quinn, Peter M.J.^Aff3, Walker, John M.^Aff1

Single-Cell RNA Sequencing of Somatosensory Neurons

Häring, Martin^{Aff3, Aff4}, Kupari, Jussi^Aff3

Seal, Rebecca P.^Aff2, Walz, Wolfgang^Aff1

Protoplast Isolation from Undifferentiated Maize Seedling Shoot Tissue

Satterlee, James W.^Aff4, Scanlon, Michael J.^Aff4

Wang, Kan^Aff2, Zhang, Feng^Aff3, Walker, John M.^Aff1

Revealing the regulation of HuMYBS3 on HuCOMT1 and HuCHI in response to biotic and abiotic stress through trypsin-induced resistance in pitaya using bulk and single-cell transcriptome profiles

Chen, Enyan, Jia, Jingyu, Sun, Jiaju, Chen, Xinxin, Li, Fuxin, Li, Xin^{Aff1, Aff2, Aff3, IDs10725025013075_cor1}

Single-cell views of fate reprogramming in de novo organogenesis

Morinaka, Hatsune^{Aff1, IDs10265025016446_cor1}, Chen, Yu, Sugimoto, Keiko^{Aff1, Aff2}

Single-cell transcriptomics in a child with coenzyme Q10 nephropathy: potential of single-cell RNA sequencing in pediatric kidney disease

Park, Peong Gang^{Aff1, Aff2}, Choi, Sowon^Aff3, Ahn, Yo Han, Kim, Seong Heon, Kim, Chaeyoon, Kim, Hyun Je^{Aff3, Aff5, Aff6, Aff7, Aff8, IDs00467024066112_cor1}, Kang, Hee Gyung^{Aff2, Aff4}

Physical inactivity exacerbates pathologic inflammatory signalling at the single cell level in patients with systemic lupus

Patterson, Sarah L, Van Phan, Hoang, Ye, Chun Jimmie, Lanata, Cristina, González, Sebastián Cruz, Park, Joonsuk, Criswell, Lindsey A, Barbour, Kamil E, Yazdany, Jinoos, Dall’Era, Maria, Sirota, Marina, Katz, Patricia, Langelier, Charles R

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Leveraging prior knowledge to infer gene regulatory networks from single-cell RNA-sequencing data

Stock, Marco^{Aff1, Aff2, Aff3, Aff4}, Losert, Corinna^{Aff2, Aff5}, Zambon, Matteo^{Aff1, Aff2, Aff3}, Popp, Niclas^{Aff1, Aff2, Aff3}, Lubatti, Gabriele^{Aff1, Aff2, Aff3}, Hörmanseder, Eva, Heinig, Matthias^{Aff2, Aff5, Aff6}, Scialdone, Antonio^{Aff1, Aff2, Aff3, IDs44320025000883_cor1}

High order expression dependencies finely resolve cryptic states and subtypes in single cell data

Jansma, Abel^{Aff1, Aff2}, Yao, Yuelin^{Aff1, Aff3}, Wolfe, Jareth, Del Debbio, Luigi, Beentjes, Sjoerd V^{Aff1, Aff4}, Ponting, Chris P^{Aff1, IDs44320024000741_cor1}, Khamseh, Ava^{Aff1, Aff2, Aff3, IDs44320024000741_cor2}

Epigenetic Insights Into Necrotizing Enterocolitis: Unraveling Methylation-Regulated Biomarkers: Methylation-Regulated Biomarkers in Necrotizing Enterocolitis

Tian, Bowen^Aff1, Xu, Xiaogang^{Aff1, Aff2}, Li, Lin^Aff2, Tian, Yan, Liu, Yanqing, Mu, Yide, Lu, Jieting, Song, Kai, lv, Junjian, He, Qiuming, Zhong, Wei^{Aff2, IDs1075302402054x_cor1}, Xia, Huimin^{Aff1, Aff2, IDs1075302402054x_cor2}, Lan, Chaoting^{Aff2, IDs1075302402054x_cor3}

multi-GAT: Integrative Analysis of scRNA-seq and scATAC-seq Data Using Graph Attention Networks for Cell Annotation

Jia, Shangru^Aff12, Tsunoda, Tatsuhiko^{Aff12, Aff13, Aff14}, Sharma, Alok^{Aff13, Aff14, Aff15, Aff16}

Goos, Gerhard, Series Editor^Aff1, Hartmanis, Juris, Founding Editor^Aff2, Bertino, Elisa, Editorial Board Member^Aff3, Gao, Wen, Editorial Board Member^Aff4, Steffen, Bernhard, Editorial Board Member^Aff5, Yung, Moti, Editorial Board Member^Aff6, Hadfi, Rafik, editor^Aff7, Anthony, Patricia, editor^Aff8, Sharma, Alok, editor^Aff9, Ito, Takayuki, editor^Aff10, Bai, Quan, editor^Aff11

Cellular heterogeneity in metabolism and associated microbiome of a non-model phytoflagellate

Jeevannavar, Aditya, Florenza, Javier, Divne, Anna-Maria, Tamminen, Manu, Bertilsson, Stefan

electronic

Advanced Process Development in Gene and Cell Therapies

Ladd, Brian

Chotteau, Véronique, Professor, 1963, Genzel, Yvonne, Professor

electronic